This package models the dynamics of a biofilm using the Julia programming language.

• Installation
• • Download & Install Julia
  • VS Code - GUI for Julia
  • Add the Biofilm.jl package
  • Run Biofilm.jl
• Case Parameters
• Examples
• • Case 1 - Single Solute and Particulate Case
  • Case 2 - Multiple Solutes
  • Case 3 - Live/Dead Bugs
  • Case 4 - Multiple Particulate and Solutes
  • Case 5 - Phototroph
• Postprocessing
• • Using the simulation outputs
  • Plot the final solution
  • biofilm_analyze() - Query Simulation at Specified Times
  • biofilm_movie() - Make movie of biofilm quantities
  • biofilm_sol2csv() - Convert solution to CSV file
• Theory
• • Tank Equations
  • Biofilm Equations